STRINGSTRING
cat1 protein (Solanum lycopersicum) - STRING interaction network
"cat1" - Catalase isozyme 1 in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cat1Catalase isozyme 1 ; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (492 aa)    
Predicted Functional Partners:
GLO2
Glycolate oxidase (371 aa)
     
 
  0.940
Solyc08g048250.2.1
Uncharacterized protein (379 aa)
     
 
  0.940
Solyc07g056540.2.1
Glycolate oxidase (371 aa)
     
 
  0.940
Solyc03g122170.2.1
Uncharacterized protein (343 aa)
     
 
  0.940
Solyc03g122140.2.1
Uncharacterized protein (363 aa)
     
 
  0.940
Solyc03g122130.2.1
Uncharacterized protein (343 aa)
     
 
  0.940
Solyc10g082030.1.1
Uncharacterized protein (267 aa)
   
  0.936
Solyc01g007740.2.1
Uncharacterized protein (267 aa)
   
  0.936
TPS1
Trehalose-6-phosphate synthase (876 aa)
     
   
  0.868
Solyc10g007950.2.1
Uncharacterized protein (857 aa)
     
   
  0.858
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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