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STRINGSTRING
Solyc12g094700.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g094700.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g094700.1.1annotation not available (331 aa)    
Predicted Functional Partners:
101262590
annotation not available (353 aa)
     
 
  0.674
101245096
Myb domain protein 83 (352 aa)
     
 
  0.674
101261553
annotation not available (330 aa)
       
 
  0.667
LOC543607
Pirin-like protein (291 aa)
       
 
  0.667
THI1
Thiamine thiazole synthase, chloroplastic; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron-dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance (354 aa)
           
  0.645
101245609
annotation not available (311 aa)
     
   
  0.582
101252786
annotation not available (322 aa)
     
   
  0.582
THox2
Homeobox 2 protein (310 aa)
     
 
  0.572
101253645
annotation not available (349 aa)
           
  0.554
Solyc07g032230.2.1
annotation not available (1073 aa)
           
  0.551
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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