STRINGSTRING
cdc2A-1 protein (Solanum lycopersicum) - STRING interaction network
"cdc2A-1" - Cyclin-dependent protein kinase p34cdc2 in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc2A-1Cyclin-dependent protein kinase p34cdc2 (294 aa)    
Predicted Functional Partners:
CycD3;2
CycD3;2 protein (364 aa)
       
  0.996
krp2
P27KIP1-related-protein 2 (188 aa)
       
 
  0.996
Solyc02g062680.2.1
Anaphase-promoting complex subunit 10 ; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle (191 aa)
     
  0.996
cycD3
CycD3;1 protein; Cyclin D3.1 (359 aa)
       
  0.994
Solyc07g009140.2.1
Uncharacterized protein (386 aa)
       
    0.993
Solyc01g108610.2.1
Uncharacterized protein (218 aa)
       
 
  0.992
CycA3
Cyclin A3 (378 aa)
     
  0.988
Solyc07g054950.1.1
Uncharacterized protein (310 aa)
       
  0.988
Solyc02g079370.2.1
Uncharacterized protein (297 aa)
       
  0.988
Solyc06g082580.2.1
Uncharacterized protein (303 aa)
       
 
  0.988
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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