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STRINGSTRING
101268174 protein (Solanum lycopersicum) - STRING interaction network
"101268174" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101268174annotation not available (722 aa)    
Predicted Functional Partners:
COP1
Uncharacterized protein; COP1 homolog (677 aa)
       
  0.953
101249698
annotation not available (672 aa)
       
  0.953
101258346
annotation not available (1167 aa)
       
  0.914
101255788
annotation not available (1167 aa)
       
  0.914
PHYB1
Phytochrome B1; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose- bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reduct [...] (1131 aa)
       
  0.889
PHYB2
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1121 aa)
       
  0.888
101257597
Uncharacterized protein; Time for coffee (1675 aa)
       
 
  0.838
Solyc07g043580.2.1
annotation not available (495 aa)
       
 
  0.831
LOC543596
Cryptochrome 2 (635 aa)
     
 
  0.827
101259391
COP1-like protein (360 aa)
         
    0.800
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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