STRINGSTRING
Solyc12g095960.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g095960.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g095960.1.1Uncharacterized protein (288 aa)    
Predicted Functional Partners:
Solyc05g013970.2.1
Uncharacterized protein (534 aa)
     
      0.897
Solyc09g098390.2.1
Uncharacterized protein (355 aa)
     
 
  0.826
Solyc02g085420.2.1
Uncharacterized protein (478 aa)
     
 
  0.826
Solyc02g090910.2.1
Uncharacterized protein (376 aa)
     
 
  0.746
Solyc12g014210.1.1
Uncharacterized protein (335 aa)
     
 
  0.741
Solyc02g021560.2.1
Uncharacterized protein (431 aa)
     
 
  0.741
Solyc03g121710.2.1
Uncharacterized protein (269 aa)
     
 
  0.721
Solyc11g065880.1.1
Uncharacterized protein (417 aa)
     
 
  0.719
Solyc03g071560.2.1
Uncharacterized protein (314 aa)
     
 
  0.718
Solyc10g005260.2.1
Uncharacterized protein (411 aa)
     
 
  0.715
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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