STRINGSTRING
Solyc12g095970.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g095970.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g095970.1.1Uncharacterized protein (190 aa)    
Predicted Functional Partners:
Solyc05g052980.2.1
Uncharacterized protein (409 aa)
       
  0.980
Solyc12g096020.1.1
Uncharacterized protein (508 aa)
       
 
  0.950
Solyc06g076400.2.1
Uncharacterized protein (410 aa)
       
 
  0.908
Solyc03g006960.2.1
Uncharacterized protein (376 aa)
       
  0.881
Solyc08g077780.2.1
Uncharacterized protein (339 aa)
           
  0.454
Solyc01g108280.2.1
Uncharacterized protein (362 aa)
           
  0.454
Solyc03g006950.1.1
Uncharacterized protein (347 aa)
       
 
  0.432
Solyc03g006940.1.1
Uncharacterized protein (345 aa)
       
 
  0.432
Solyc04g054840.1.1
Uncharacterized protein (503 aa)
           
  0.426
Solyc01g014480.2.1
Uncharacterized protein (675 aa)
           
  0.426
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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