STRINGSTRING
Solyc12g096100.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g096100.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g096100.1.1Uncharacterized protein (193 aa)    
Predicted Functional Partners:
Solyc03g006540.2.1
Uncharacterized protein (180 aa)
   
        0.546
Solyc01g097820.2.1
Uncharacterized protein (250 aa)
   
          0.524
Solyc06g084470.2.1
Uncharacterized protein (172 aa)
   
        0.521
Solyc03g116870.2.1
Uncharacterized protein (463 aa)
   
        0.520
Solyc05g014190.2.1
Uncharacterized protein (209 aa)
   
          0.515
Solyc06g054110.1.1
Uncharacterized protein (170 aa)
   
          0.514
Solyc10g081470.1.1
Lutescent 2 (547 aa)
   
        0.513
Solyc02g086050.2.1
Uncharacterized protein (250 aa)
   
          0.512
Solyc02g005200.2.1
Uncharacterized protein (365 aa)
   
        0.509
Solyc02g063170.2.1
Uncharacterized protein (246 aa)
   
          0.508
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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