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STRINGSTRING
Solyc12g096430.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g096430.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g096430.1.1annotation not available (622 aa)    
Predicted Functional Partners:
101249483
ALC-interacting protein 1 (307 aa)
           
  0.691
101252637
MLO-like protein; May be involved in modulation of pathogen defense and leaf cell death (475 aa)
           
  0.649
Solyc06g067990.2.1
annotation not available (419 aa)
     
   
  0.549
101266142
Ubiquitinyl hydrolase 1; Ubiquitin-specific protease 14 (801 aa)
     
   
  0.548
DEAD30
RNA helicase 36; Belongs to the DEAD box helicase family (488 aa)
     
        0.542
Solyc09g018730.2.1
annotation not available (315 aa)
           
  0.533
Solyc10g086770.1.1
Josephin family protein (207 aa)
           
  0.495
101267342
JOSEPHIN-like protein (179 aa)
           
  0.495
Solyc04g053080.2.1
Cysteine proteinases superfamily protein (309 aa)
           
  0.410
101264788
annotation not available (524 aa)
           
  0.408
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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