STRINGSTRING
Solyc12g096450.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g096450.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g096450.1.1Uncharacterized protein (415 aa)    
Predicted Functional Partners:
Solyc11g071910.1.1
Uncharacterized protein (589 aa)
     
 
  0.850
Solyc01g005810.2.1
Uncharacterized protein (302 aa)
     
        0.831
Solyc11g011780.1.1
Uncharacterized protein (502 aa)
     
 
  0.825
Solyc06g053800.1.1
Uncharacterized protein (505 aa)
     
 
  0.825
Solyc09g061430.2.1
Putative nuclear GTPase (609 aa)
     
 
  0.753
Solyc06g084270.2.1
Uncharacterized protein (370 aa)
     
 
  0.753
Solyc06g083520.2.1
Uncharacterized protein (605 aa)
     
 
  0.753
Solyc06g082090.2.1
Uncharacterized protein (387 aa)
     
 
  0.714
Solyc06g007200.2.1
Uncharacterized protein (390 aa)
     
 
  0.714
Solyc09g098360.2.1
Uncharacterized protein (260 aa)
     
        0.670
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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