STRINGSTRING
Solyc12g096470.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g096470.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g096470.1.1Uncharacterized protein (138 aa)    
Predicted Functional Partners:
Solyc04g010090.2.1
Uncharacterized protein (161 aa)
     
  0.996
Solyc06g065700.2.1
Uncharacterized protein (685 aa)
     
  0.996
Solyc02g078300.2.1
Uncharacterized protein (128 aa)
     
  0.996
Solyc07g006820.2.1
Uncharacterized protein (1823 aa)
       
  0.996
Solyc03g119780.2.1
Uncharacterized protein (1509 aa)
       
  0.996
Solyc01g028930.2.1
Uncharacterized protein (203 aa)
       
  0.994
Solyc04g078050.2.1
Uncharacterized protein (934 aa)
     
  0.994
Solyc09g009680.2.1
Uncharacterized protein (566 aa)
     
  0.990
Solyc03g122020.2.1
Uncharacterized protein (642 aa)
     
  0.990
Solyc02g069170.1.1
Uncharacterized protein (280 aa)
       
  0.988
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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