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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc12g096670.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g096670.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g096670.1.1annotation not available (574 aa)    
Predicted Functional Partners:
101256586
annotation not available (879 aa)
       
 
  0.667
101262006
annotation not available (877 aa)
       
 
  0.667
101261907
Uncharacterized protein; NAD(P)-binding Rossmann-fold superfamily protein (426 aa)
     
 
  0.656
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
   
 
  0.651
101260050
Elongator complex protein 1; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1314 aa)
     
 
  0.588
Solyc05g056590.2.1
Uncharacterized protein; Regulator of chromosome condensation (RCC1) family protein (275 aa)
     
 
  0.482
101253941
Uncharacterized protein; Regulator of chromosome condensation (RCC1) family protein (443 aa)
     
 
  0.480
101244604
annotation not available (238 aa)
       
 
  0.445
Solyc08g061850.2.1
annotation not available (250 aa)
       
 
  0.445
101257282
annotation not available (239 aa)
       
 
  0.445
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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