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TAPG5 protein (Solanum lycopersicum) - STRING interaction network
"TAPG5" - Polygalacturonase 5 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAPG5Polygalacturonase 5 (387 aa)    
Predicted Functional Partners:
TAP1
Suberization-associated anionic peroxidase 1; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue; Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily (364 aa)
           
  0.797
Solyc01g099960.2.1
Pectinesterase; Plant invertase/pectin methylesterase inhibitor superfamily (574 aa)
   
   
  0.779
Solyc00g027770.2.1
Pectin methylesterase 31 (317 aa)
   
   
  0.777
101261743
annotation not available (387 aa)
   
   
  0.771
Solyc07g017600.2.1
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (539 aa)
   
   
  0.761
101268391
annotation not available (347 aa)
   
 
  0.759
104648548
annotation not available (356 aa)
   
   
  0.758
101256106
annotation not available (357 aa)
   
   
  0.757
101244818
Pectinesterase 11 (343 aa)
   
 
  0.757
101266973
annotation not available (560 aa)
   
   
  0.748
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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