STRINGSTRING
Solyc12g097060.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g097060.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g097060.1.1Uncharacterized protein (224 aa)    
Predicted Functional Partners:
Solyc09g065990.2.1
Uncharacterized protein (430 aa)
       
      0.596
Solyc06g084040.2.1
Uncharacterized protein (431 aa)
       
      0.596
Solyc06g008600.2.1
Uncharacterized protein (418 aa)
       
      0.596
Solyc11g012710.1.1
Tau2 (272 aa)
           
  0.487
LOC543678
Sip1 (285 aa)
           
  0.487
Solyc09g083310.1.1
Uncharacterized protein (400 aa)
       
      0.444
Solyc09g083300.1.1
Uncharacterized protein (267 aa)
       
      0.444
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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