STRINGSTRING
Solyc12g099020.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g099020.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g099020.1.1Uncharacterized protein (120 aa)    
Predicted Functional Partners:
Solyc10g006270.2.1
Autophagy-related protein (147 aa)
       
 
  0.902
Solyc08g078820.2.1
Autophagy 8f (198 aa)
       
 
  0.902
Solyc08g007400.2.1
Autophagy-related protein (119 aa)
       
 
  0.902
Solyc07g064680.2.1
Autophagy 8a (119 aa)
       
 
  0.902
Solyc03g031650.2.1
Autophagy-related protein (123 aa)
       
 
  0.902
Solyc02g080590.2.1
Autophagy-related protein (123 aa)
       
 
  0.902
Solyc01g068060.2.1
Autophagy 8h (119 aa)
       
 
  0.902
Solyc12g040510.1.1
Uncharacterized protein (329 aa)
     
  0.524
ArcA1
LeArcA1 protein (326 aa)
     
  0.524
ArcA2
LeArcA2 protein (326 aa)
     
  0.524
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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