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Solyc12g099030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g099030.1.1" - Ubiquitin in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Databases
Textmining
[Homology]
Score
Solyc12g099030.1.1Ubiquitin (190 aa)    
Predicted Functional Partners:
UBI3
Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin tha [...] (156 aa)
   
 
 
0.904
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
     
  0.884
Solyc09g065330.2.1
40S ribosomal protein S24 (133 aa)
   
  0.860
Solyc06g084230.2.1
40S ribosomal protein S24 (133 aa)
   
  0.860
Solyc01g097870.2.1
40S ribosomal protein S24 (133 aa)
   
  0.860
Solyc12g039120.1.1
Uncharacterized protein (143 aa)
     
  0.849
Solyc03g115360.2.1
Uncharacterized protein (143 aa)
     
  0.849
Solyc12g096300.1.1
40S ribosomal protein S6 (249 aa)
   
  0.839
Solyc08g074240.2.1
40S ribosomal protein S6 (249 aa)
   
  0.839
Solyc08g006040.2.1
40S ribosomal protein S6 (249 aa)
   
  0.839
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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