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STRINGSTRING
101245931 protein (Solanum lycopersicum) - STRING interaction network
"101245931" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245931annotation not available (690 aa)    
Predicted Functional Partners:
101243936
annotation not available (861 aa)
       
 
  0.705
Solyc07g052340.2.1
Uncharacterized protein; Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain (884 aa)
       
 
  0.705
101263805
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Putative zinc-finger domain (InterPro-IPR019607); Has 249 Blast hits to 219 proteins in 85 species- Archae - 0; Bacteria - 144; Metazoa - 29; Fungi - 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18 (source- NCBI BLink) (1750 aa)
       
 
  0.617
Solyc04g057990.2.1
Uncharacterized protein; Zinc finger C-x8-C-x5-C-x3-H type family protein (1579 aa)
       
 
  0.580
101256793
Uncharacterized protein; mRNAadenosine methylase; Belongs to the MT-A70-like family (739 aa)
           
  0.574
101261702
FKBP12 interacting protein 37 (342 aa)
     
   
  0.569
CNOT1
Uncharacterized protein; Transcription regulators (2411 aa)
     
   
  0.556
101266142
Ubiquitinyl hydrolase 1; Ubiquitin-specific protease 14 (801 aa)
     
      0.554
Solyc05g013530.2.1
Uncharacterized protein; octicosapeptide/Phox/Bem1p (PB1) domain-containing protein (219 aa)
           
  0.554
101268737
annotation not available (285 aa)
       
 
  0.548
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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