• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc12g099180.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g099180.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g099180.1.1annotation not available (435 aa)    
Predicted Functional Partners:
101261244
Uncharacterized protein; Homolog of yeast FIP1 [V] (1380 aa)
     
 
  0.983
101254167
Uncharacterized protein; Cleavage and polyadenylation specificity factor 100 (739 aa)
     
 
  0.945
101249869
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (741 aa)
     
 
  0.943
101254355
annotation not available (671 aa)
     
 
  0.941
101263950
annotation not available (689 aa)
     
 
  0.941
Solyc03g007100.2.1
Uncharacterized protein; Cleavage and polyadenylation specificity factor 160 (1425 aa)
     
 
  0.916
101259137
Fip1 motif-containing protein (1130 aa)
     
 
  0.883
Solyc07g049480.2.1
Uncharacterized protein; Cleavage and polyadenylation specificity factor 73-I (731 aa)
     
 
  0.861
101264202
Uncharacterized protein; RNA-metabolising metallo-beta-lactamase family protein (852 aa)
     
 
  0.861
Solyc08g067040.2.1
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (764 aa)
     
 
  0.856
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (12%) [HD]