STRINGSTRING
Solyc12g099520.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g099520.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g099520.1.1Uncharacterized protein (160 aa)    
Predicted Functional Partners:
Solyc01g094290.2.1
Uncharacterized protein (1198 aa)
         
  0.499
Solyc12g049590.1.1
Uncharacterized protein (1801 aa)
       
 
  0.497
Solyc11g013830.1.1
Uncharacterized protein (1421 aa)
       
 
  0.497
Solyc07g017510.2.1
Uncharacterized protein (1773 aa)
       
 
  0.497
Solyc06g065540.2.1
Uncharacterized protein (1559 aa)
       
 
  0.497
Solyc05g008200.2.1
Uncharacterized protein (1738 aa)
       
 
  0.497
Solyc04g007650.2.1
Uncharacterized protein (1654 aa)
       
 
  0.497
Solyc03g123570.2.1
Uncharacterized protein (1782 aa)
       
 
  0.497
Solyc09g008130.2.1
Phosphoglycerate kinase (683 aa)
         
  0.481
Solyc12g094640.1.1
Glyceraldehyde-3-phosphate dehydrogenase (450 aa)
       
  0.446
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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