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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc12g099600.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g099600.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g099600.1.1annotation not available (575 aa)    
Predicted Functional Partners:
Solyc03g013140.1.1
annotation not available (163 aa)
     
 
  0.617
101253788
Uncharacterized protein; Chitinase A; Belongs to the glycosyl hydrolase 18 family (292 aa)
           
  0.574
101255550
annotation not available (850 aa)
           
  0.556
Solyc08g065680.1.1
annotation not available (205 aa)
     
 
  0.526
Solyc07g037960.1.1
annotation not available (485 aa)
     
   
  0.518
Solyc07g037950.1.1
annotation not available (484 aa)
     
   
  0.518
101257321
annotation not available (128 aa)
           
  0.517
TFHS1
Heat shock protein; Lycopersicum esculentum mRNA sequence (97 aa)
           
  0.517
101250042
annotation not available (148 aa)
           
  0.517
101257483
annotation not available (371 aa)
           
  0.517
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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