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STRINGSTRING
Solyc12g100290.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g100290.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g100290.1.1annotation not available (434 aa)    
Predicted Functional Partners:
101055576
DNA polymerase alpha catalytic subunit (1561 aa)
     
 
  0.663
101257380
Histone deacetylase 8 (385 aa)
   
 
  0.659
101244931
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (315 aa)
         
  0.653
FIE
Fertilization-independent endosperm protein (372 aa)
     
 
  0.632
Solyc04g071570.2.1
SET domain-containing protein (635 aa)
           
  0.619
101256302
DNA helicase; Minichromosome maintenance (MCM2/3/5) family protein; Belongs to the MCM family (737 aa)
     
        0.615
Solyc02g091120.2.1
DNA LIGASE 6 (1473 aa)
     
      0.608
101263337
Protein arginine methyltransferase 10; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (371 aa)
     
 
  0.570
101261348
Uncharacterized protein; Histone deacetylase 2 (347 aa)
   
 
  0.570
101265411
ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 (357 aa)
     
   
  0.567
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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