STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104222902Ethylene-responsive transcription factor 4. (227 aa)    
Predicted Functional Partners:
LOC104225242
Dof zinc finger protein DOF5.8-like.
  
     0.529
LOC104223458
Dof zinc finger protein DOF2.1-like.
  
     0.517
LOC104240098
Dof zinc finger protein DOF2.4-like.
  
     0.506
LOC104210756
Dof zinc finger protein DOF3.1-like.
  
     0.505
LOC104232813
Dof zinc finger protein DOF2.5-like.
  
     0.500
LOC104227120
Dof zinc finger protein DOF2.4-like.
  
   
 0.491
LOC104245208
Dof zinc finger protein DOF2.4-like.
  
     0.491
LOC104236115
Dof zinc finger protein DOF3.4-like.
  
     0.490
LOC104212652
Dof zinc finger protein DOF2.5 isoform X1.
  
     0.489
LOC104215980
Uncharacterized protein LOC104215980.
  
     0.486
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.