STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104224357Dof zinc finger protein DOF5.7. (356 aa)    
Predicted Functional Partners:
LOC104220549
Probable WRKY transcription factor 2 isoform X1.
  
     0.470
LOC104225953
Ethylene-responsive transcription factor ABI4.
  
     0.452
LOC104239316
Ethylene-responsive transcription factor ABR1-like isoform X1.
  
     0.446
LOC104244412
Pathogenesis-related genes transcriptional activator PTI6-like.
  
     0.443
LOC104232685
Uncharacterized protein LOC104232685.
  
     0.441
LOC104227296
Ethylene-responsive transcription factor ABR1-like isoform X1.
  
     0.436
LOC104227552
Uncharacterized protein LOC104227552.
  
     0.431
LOC104233176
Ethylene-responsive transcription factor RAP2-7-like isoform X1.
  
     0.428
LOC104224390
Basic leucine zipper 43-like.
  
     0.425
LOC104236237
Protein TIFY 6B-like isoform X1.
  
     0.422
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.