STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104229283Transcription factor VOZ1-like. (477 aa)    
Predicted Functional Partners:
LOC104231196
Uncharacterized protein At1g28695-like.
  
     0.528
LOC104212095
Uncharacterized protein LOC104212095.
  
     0.517
LOC104222952
F-box/LRR-repeat protein At1g67190-like isoform X1.
  
     0.514
LOC104232513
Uncharacterized protein LOC104232513.
  
     0.508
LOC104244902
Uncharacterized protein LOC104244902.
  
     0.505
LOC104227048
Uncharacterized protein LOC104227048 isoform X1.
  
     0.504
LOC104215670
Uncharacterized protein LOC104215670.
  
     0.503
LOC104247657
F-box/LRR-repeat protein At1g67190-like.
  
     0.501
LOC104220768
F-box/LRR-repeat protein At1g67190-like isoform X1.
  
     0.500
LOC104227501
F-box/LRR-repeat protein At1g67190-like.
  
     0.500
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.