STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104233013Ethylene-responsive transcription factor ERF109-like. (275 aa)    
Predicted Functional Partners:
LOC104249004
Serine/threonine-protein kinase STN7, chloroplastic-like isoform X1.
  
 
  0.508
LOC104233505
Mitochondrial import receptor subunit TOM20-like isoform X1.
  
     0.501
LOC104231910
Mitochondrial import receptor subunit TOM20.
  
     0.491
LOC104237581
Mitochondrial import receptor subunit TOM20-like.
  
     0.487
LOC104236183
Dof zinc finger protein DOF1.8-like.
  
     0.476
LOC104227120
Dof zinc finger protein DOF2.4-like.
  
     0.475
LOC104217460
Dof zinc finger protein DOF4.6-like.
  
     0.474
LOC104234526
Dof zinc finger protein DOF5.4-like.
  
     0.471
LOC104240098
Dof zinc finger protein DOF2.4-like.
  
     0.467
LOC104241557
Dof zinc finger protein DOF1.5-like.
  
     0.458
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.