STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC104239409LOB domain-containing protein 41-like. (236 aa)    
Predicted Functional Partners:
LOC104217864
Trihelix transcription factor GT-2-like.
  
   
 0.674
LOC104226932
Transcription factor bHLH87-like.
  
   
 0.581
LOC104228497
Zinc finger protein ZAT11-like.
      
 0.557
LOC104240842
NAC domain-containing protein 76 isoform X1.
  
   
 0.554
LOC104238050
Transcription factor bHLH87-like.
  
   
 0.544
LOC104234106
Uncharacterized protein LOC104234106.
  
   
 0.529
LOC104237493
LOB domain-containing protein 19.
  
   
 0.528
LOC104221737
Trihelix transcription factor GT-2.
      
 0.497
LOC104214140
Probable acyl-activating enzyme 17, peroxisomal isoform X1.
      
 0.495
LOC104235824
Probable acyl-activating enzyme 17, peroxisomal.
      
 0.495
Your Current Organism:
Nicotiana sylvestris
NCBI taxonomy Id: 4096
Other names: N. sylvestris, Nicotiana sylvestris Speg. & Comes, wood tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.