STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107792162Probable L-ascorbate peroxidase 6, chloroplastic isoform X1; Belongs to the peroxidase family. (435 aa)    
Predicted Functional Partners:
LOC107777254
Glutathione S-transferase DHAR2-like; Belongs to the GST superfamily.
     
 0.842
LOC107819842
Glutathione S-transferase DHAR2-like; Belongs to the GST superfamily.
     
 0.842
LOC107773610
Glutathione S-transferase DHAR3, chloroplastic; Belongs to the GST superfamily.
   
 
 0.815
LOC107820316
Monodehydroascorbate reductase 5, mitochondrial-like isoform X1.
     
 0.812
LOC107828222
Monodehydroascorbate reductase 5, mitochondrial-like.
     
 0.812
LOC107775678
Monodehydroascorbate reductase-like.
     
 0.783
LOC107779915
Monodehydroascorbate reductase.
     
 0.783
LOC107768281
Monodehydroascorbate reductase 4, peroxisomal-like.
     
 0.756
LOC107818762
Monodehydroascorbate reductase 4, peroxisomal-like.
     
 0.756
LOC107787357
L-galactono-1,4-lactone dehydrogenase, mitochondrial-like.
     
 0.743
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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