STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107802863ATP-dependent DNA helicase; Belongs to the helicase family. (699 aa)    
Predicted Functional Partners:
LOC107790601
Uncharacterized protein LOC107790601.
  
     0.524
LOC107790652
Uncharacterized protein LOC107790652.
  
     0.522
LOC107807452
Uncharacterized protein LOC107807452.
  
     0.522
LOC107824026
Uncharacterized protein LOC107824026.
  
     0.522
LOC107827095
Uncharacterized protein LOC107827095.
  
     0.522
LOC107793057
Uncharacterized protein LOC107793057.
  
     0.521
LOC107827294
Uncharacterized protein LOC107827294.
  
     0.521
LOC107818472
Uncharacterized protein LOC107818472.
  
     0.520
LOC107815295
Uncharacterized protein LOC107815295.
  
     0.518
LOC107826078
Uncharacterized protein LOC107826078.
  
     0.518
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.