STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107808915Uncharacterized protein LOC107808915. (143 aa)    
Predicted Functional Partners:
LOC107799576
Uncharacterized protein LOC107799576.
  
     0.531
LOC107790601
Uncharacterized protein LOC107790601.
  
     0.529
LOC107827294
Uncharacterized protein LOC107827294.
  
     0.529
LOC107826078
Uncharacterized protein LOC107826078.
  
     0.527
LOC107791559
Uncharacterized protein LOC107791559.
  
     0.523
LOC107807452
Uncharacterized protein LOC107807452.
  
     0.522
LOC107815295
Uncharacterized protein LOC107815295.
  
     0.522
LOC107814528
Uncharacterized protein LOC107814528.
  
     0.521
LOC107783178
Uncharacterized protein LOC107783178.
  
     0.519
LOC107780595
ATP-dependent DNA helicase; Belongs to the helicase family.
  
     0.515
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.