STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABSCis-abienol synthase, chloroplastic; Involved in the biosynthesis of cis-abienol, a labdane diterpene that can be used as synthesis precursor of ambergris substitution fragance products; Belongs to the terpene synthase family. (792 aa)    
Predicted Functional Partners:
aoc
Allene oxide cyclase 4, chloroplastic-like.
  
   
 0.607
LOC107782042
Gibberellin 2-beta-dioxygenase 1-like; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.540
LOC107759218
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.530
LOC107765219
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.530
LOC107772411
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.530
HMGR1
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.530
HMGRL
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.530
LOC107772124
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.529
LOC107777352
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
      
 0.529
LOC107777769
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.529
Your Current Organism:
Nicotiana tabacum
NCBI taxonomy Id: 4097
Other names: American tobacco, N. tabacum, Nicotiana tabacum L., common tobacco, tobacco
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