STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_1450PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein. (472 aa)    
Predicted Functional Partners:
Mlab_1452
Putative anti-sigma regulatory factor, serine/threonine protein kinase.
 
 0.926
Mlab_1451
PFAM: Sulfate transporter/antisigma-factor antagonist STAS.
 
 
 0.924
cofG
Radical SAM domain protein; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil.
  
  
 0.696
Mlab_0123
PFAM: Radical SAM domain protein.
  
  
 0.600
Mlab_1449
PFAM: membrane-bound metal-dependent hydrolase.
       0.505
Mlab_0663
PFAM: glycosyl transferase, family 2.
 
  
 0.454
Mlab_1624
Ech hydrogenase subunit A; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
 
   
 0.453
Mlab_0201
TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
     0.431
Mlab_1448
PFAM: nitroreductase.
       0.404
mutL
DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.
 
   
 0.400
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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