STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mlab_1743Uncharacterized protein-like protein; Belongs to the UPF0254 family. (172 aa)    
Predicted Functional Partners:
Mlab_1740
Uncharacterized protein-like protein.
     
 0.847
Mlab_1742
PFAM: UBA/THIF-type NAD/FAD binding protein.
     
 0.846
Mlab_1739
Uncharacterized protein-like protein.
     
 0.835
Mlab_1738
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
     
 0.833
Mlab_1741
PFAM: protein of unknown function DUF34.
       0.796
hmd
H2-forming methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
     
 0.565
Your Current Organism:
Methanocorpusculum labreanum
NCBI taxonomy Id: 410358
Other names: M. labreanum Z, Methanocorpusculum labreanum Z, Methanocorpusculum labreanum str. Z, Methanocorpusculum labreanum strain Z
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