node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pcal_0523 | Pcal_1797 | Pcal_0523 | Pcal_1797 | PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase. | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.924 |
Pcal_0523 | cmk | Pcal_0523 | Pcal_1109 | PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase. | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | 0.920 |
Pcal_0523 | rpl14 | Pcal_0523 | Pcal_1784 | PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.898 |
Pcal_0523 | rpl22 | Pcal_0523 | Pcal_0556 | PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.872 |
Pcal_0523 | rpl24 | Pcal_0523 | Pcal_1748 | PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.939 |
Pcal_0523 | rps4e | Pcal_0523 | Pcal_1747 | PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase. | PFAM: RNA-binding S4 domain protein; Ribosomal protein S4E-like; Ribosomal protein S4E, central; KEGG: pai:PAE3313 ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.720 |
Pcal_1797 | Pcal_0523 | Pcal_1797 | Pcal_0523 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase. | 0.924 |
Pcal_1797 | cmk | Pcal_1797 | Pcal_1109 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | 0.917 |
cmk | Pcal_0523 | Pcal_1109 | Pcal_0523 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase. | 0.920 |
cmk | Pcal_1797 | Pcal_1109 | Pcal_1797 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.917 |
cmk | rpl14 | Pcal_1109 | Pcal_1784 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.916 |
cmk | rpl14e | Pcal_1109 | Pcal_0053 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | KEGG: pai:PAE0862 ribosomal protein L14; Belongs to the eukaryotic ribosomal protein eL14 family. | 0.920 |
cmk | rpl22 | Pcal_1109 | Pcal_0556 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.921 |
cmk | rpl24 | Pcal_1109 | Pcal_1748 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.916 |
cmk | rpl34e | Pcal_1109 | Pcal_1110 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | PFAM: Ribosomal protein L34e; KEGG: pai:PAE3224 ribosomal protein L34; Belongs to the eukaryotic ribosomal protein eL34 family. | 0.986 |
cmk | rpl4 | Pcal_1109 | Pcal_1584 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.926 |
cmk | rps4e | Pcal_1109 | Pcal_1747 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | PFAM: RNA-binding S4 domain protein; Ribosomal protein S4E-like; Ribosomal protein S4E, central; KEGG: pai:PAE3313 ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.914 |
cmk | truB | Pcal_1109 | Pcal_0054 | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.925 |
rpl14 | Pcal_0523 | Pcal_1784 | Pcal_0523 | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | PFAM: nucleoside diphosphate kinase; KEGG: pai:PAE1561 nucleoside diphosphate kinase. | 0.898 |
rpl14 | cmk | Pcal_1784 | Pcal_1109 | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | TIGRFAM: cytidylate kinase, putative; KEGG: pai:PAE3225 cytidylate kinase (cmk). | 0.916 |