Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| GFO_0663 | GFO_0666 | GFO_0663 | GFO_0666 | Exonuclease family protein. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.550 |
| GFO_0663 | pcm | GFO_0663 | GFO_0668 | Exonuclease family protein. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.448 |
| GFO_0666 | GFO_0663 | GFO_0666 | GFO_0663 | 3-hydroxybutyryl-CoA dehydrogenase. | Exonuclease family protein. | 0.550 |
| GFO_0666 | GFO_0667 | GFO_0666 | GFO_0667 | 3-hydroxybutyryl-CoA dehydrogenase. | GFO/IDH/MocA family oxidoreductase. | 0.749 |
| GFO_0666 | gltB | GFO_0666 | GFO_2908 | 3-hydroxybutyryl-CoA dehydrogenase. | Glutamate synthase (NADPH) large subunit. | 0.499 |
| GFO_0666 | pcm | GFO_0666 | GFO_0668 | 3-hydroxybutyryl-CoA dehydrogenase. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.449 |
| GFO_0667 | GFO_0666 | GFO_0667 | GFO_0666 | GFO/IDH/MocA family oxidoreductase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.749 |
| GFO_0667 | pcm | GFO_0667 | GFO_0668 | GFO/IDH/MocA family oxidoreductase. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.666 |
| GFO_1834 | pcm | GFO_1834 | GFO_0668 | Conserved hypothetical protein. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.442 |
| ereB | pcm | GFO_0918 | GFO_0668 | Erythromycin esterase type II. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.458 |
| gltB | GFO_0666 | GFO_2908 | GFO_0666 | Glutamate synthase (NADPH) large subunit. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.499 |
| gltB | pcm | GFO_2908 | GFO_0668 | Glutamate synthase (NADPH) large subunit. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.518 |
| mltG | pcm | GFO_0626 | GFO_0668 | Aminodeoxychorismate lyase family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 0.618 |
| pcm | GFO_0663 | GFO_0668 | GFO_0663 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Exonuclease family protein. | 0.448 |
| pcm | GFO_0666 | GFO_0668 | GFO_0666 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.449 |
| pcm | GFO_0667 | GFO_0668 | GFO_0667 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | GFO/IDH/MocA family oxidoreductase. | 0.666 |
| pcm | GFO_1834 | GFO_0668 | GFO_1834 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Conserved hypothetical protein. | 0.442 |
| pcm | ereB | GFO_0668 | GFO_0918 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Erythromycin esterase type II. | 0.458 |
| pcm | gltB | GFO_0668 | GFO_2908 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Glutamate synthase (NADPH) large subunit. | 0.518 |
| pcm | mltG | GFO_0668 | GFO_0626 | protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. | Aminodeoxychorismate lyase family protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.618 |
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