Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GFO_0762 | GFO_1633 | GFO_0762 | GFO_1633 | Conserved hypothetical protein. | Glycosyl transferase, group 1. | 0.878 |
GFO_0762 | GFO_1635 | GFO_0762 | GFO_1635 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.435 |
GFO_0762 | GFO_3125 | GFO_0762 | GFO_3125 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.439 |
GFO_0762 | GFO_3209 | GFO_0762 | GFO_3209 | Conserved hypothetical protein. | Protein containing DUF1094; Belongs to the UPF0403 family. | 0.647 |
GFO_0762 | bshC | GFO_0762 | GFO_2232 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the BshC family. | 0.875 |
GFO_0762 | gldC | GFO_0762 | GFO_2781 | Conserved hypothetical protein. | Gliding motility protein GldC. | 0.540 |
GFO_1239 | GFO_1633 | GFO_1239 | GFO_1633 | Conserved hypothetical protein, secreted. | Glycosyl transferase, group 1. | 0.544 |
GFO_1239 | GFO_1635 | GFO_1239 | GFO_1635 | Conserved hypothetical protein, secreted. | Conserved hypothetical protein. | 0.431 |
GFO_1239 | GFO_3209 | GFO_1239 | GFO_3209 | Conserved hypothetical protein, secreted. | Protein containing DUF1094; Belongs to the UPF0403 family. | 0.529 |
GFO_1239 | bshC | GFO_1239 | GFO_2232 | Conserved hypothetical protein, secreted. | Conserved hypothetical protein; Belongs to the BshC family. | 0.573 |
GFO_1633 | GFO_0762 | GFO_1633 | GFO_0762 | Glycosyl transferase, group 1. | Conserved hypothetical protein. | 0.878 |
GFO_1633 | GFO_1239 | GFO_1633 | GFO_1239 | Glycosyl transferase, group 1. | Conserved hypothetical protein, secreted. | 0.544 |
GFO_1633 | GFO_1635 | GFO_1633 | GFO_1635 | Glycosyl transferase, group 1. | Conserved hypothetical protein. | 0.827 |
GFO_1633 | GFO_2947 | GFO_1633 | GFO_2947 | Glycosyl transferase, group 1. | Conserved hypothetical protein, secreted. | 0.550 |
GFO_1633 | GFO_3209 | GFO_1633 | GFO_3209 | Glycosyl transferase, group 1. | Protein containing DUF1094; Belongs to the UPF0403 family. | 0.769 |
GFO_1633 | bshC | GFO_1633 | GFO_2232 | Glycosyl transferase, group 1. | Conserved hypothetical protein; Belongs to the BshC family. | 0.782 |
GFO_1635 | GFO_0762 | GFO_1635 | GFO_0762 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.435 |
GFO_1635 | GFO_1239 | GFO_1635 | GFO_1239 | Conserved hypothetical protein. | Conserved hypothetical protein, secreted. | 0.431 |
GFO_1635 | GFO_1633 | GFO_1635 | GFO_1633 | Conserved hypothetical protein. | Glycosyl transferase, group 1. | 0.827 |
GFO_1635 | GFO_3125 | GFO_1635 | GFO_3125 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.750 |
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