STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0ZJC8_SOLTUProtein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment. (194 aa)    
Predicted Functional Partners:
M1B4H5_SOLTU
Uncharacterized protein.
    
 
 0.616
M1BL96_SOLTU
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 
 0.557
M1CQV9_SOLTU
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 
 0.536
M1A3J2_SOLTU
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 
 0.481
M1AIX9_SOLTU
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.446
M0ZGL7_SOLTU
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 
 0.442
M0ZYV4_SOLTU
GOLD domain-containing protein.
   
 
 0.418
M1B1K9_SOLTU
GOLD domain-containing protein.
   
 
 0.418
M1C099_SOLTU
GOLD domain-containing protein.
   
 
 0.418
M1CX30_SOLTU
GOLD domain-containing protein.
   
 
 0.418
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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