STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0ZMR8_SOLTUCSD_1 domain-containing protein. (144 aa)    
Predicted Functional Partners:
M1CFG2_SOLTU
Protein kinase domain-containing protein.
      
 0.677
M1DCP1_SOLTU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.677
M0ZL17_SOLTU
Uncharacterized protein.
    
 
 0.676
M0ZHQ3_SOLTU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.671
M1BCC7_SOLTU
Uncharacterized protein.
      
 0.671
M1CW32_SOLTU
Cwf21 domain-containing protein.
    
 0.593
M1CPZ1_SOLTU
Sm domain-containing protein.
    
  0.589
M0ZWB6_SOLTU
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.588
M1AHN9_SOLTU
Uncharacterized protein.
  
 
 0.586
M1CX25_SOLTU
RPOLD domain-containing protein.
   
 
 0.540
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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