STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M0ZQS0_SOLTURRM domain-containing protein. (178 aa)    
Predicted Functional Partners:
M1BQC6_SOLTU
RRM_8 domain-containing protein.
 
    
0.705
M1BM83_SOLTU
G-patch domain-containing protein.
    
 0.627
M1BSI6_SOLTU
Uncharacterized protein.
   
 
  0.609
M1CLI8_SOLTU
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 
  0.606
M1BH20_SOLTU
RRM domain-containing protein.
   
 0.546
M1BLV8_SOLTU
Uncharacterized protein.
   
 0.546
M1AXV5_SOLTU
RRM domain-containing protein.
   
 0.523
M1BI11_SOLTU
RRM domain-containing protein.
   
 0.523
M1CJ95_SOLTU
TFIIF_beta domain-containing protein.
   
 
  0.479
M1CPI0_SOLTU
TFIIF_beta domain-containing protein.
   
 
  0.479
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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