STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIP1PLipoyl synthase, chloroplastic; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (313 aa)    
Predicted Functional Partners:
M1BEQ8_SOLTU
BPL/LPL catalytic domain-containing protein.
 
 
 0.985
M1AQI2_SOLTU
BPL/LPL catalytic domain-containing protein.
 
 
 0.981
M1D4F2_SOLTU
BPL/LPL catalytic domain-containing protein.
 
 
 0.981
M1D4J0_SOLTU
BPL/LPL catalytic domain-containing protein.
 
 
 0.979
LIP1
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
  
  
 
0.902
M1CGT1_SOLTU
BPL/LPL catalytic domain-containing protein.
  
 
 0.895
M0ZQJ7_SOLTU
Lactamase_B domain-containing protein.
    
 0.716
M0ZR92_SOLTU
Lactamase_B domain-containing protein.
    
 0.716
M0ZPT4_SOLTU
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
   
 0.715
M1ANP1_SOLTU
Uncharacterized protein.
   
 0.715
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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