STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1A6I5_SOLTUWD_REPEATS_REGION domain-containing protein. (391 aa)    
Predicted Functional Partners:
M1AB58_SOLTU
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.967
Q307Y7_SOLTU
GTPase-like; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.967
SAR1A
GTP-binding protein SAR1A-like protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.967
Q3HRY1_SOLTU
Small GTP-binding protein Sar1BNt-like protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.967
M1CLX5_SOLTU
WD_REPEATS_REGION domain-containing protein.
  
  
 
0.911
M0ZJ90_SOLTU
Basic helix-loop-helix 7.
   
 0.704
M1B961_SOLTU
BHLH domain-containing protein.
   
 0.704
M1C273_SOLTU
BHLH domain-containing protein.
   
 0.704
M1CHR5_SOLTU
Uncharacterized protein.
   
 
 0.684
M1B1D5_SOLTU
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.628
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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