STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AAB1_SOLTUPeptide-methionine (R)-S-oxide reductase; Catalyzes the reduction of methionine sulfoxide (MetSO) to methionine in proteins. Plays a protective role against oxidative stress by restoring activity to proteins that have been inactivated by methionine oxidation. MSRB family specifically reduces the MetSO R- enantiomer. (148 aa)    
Predicted Functional Partners:
M0ZW30_SOLTU
PMSR domain-containing protein.
 
 
 0.879
M1B873_SOLTU
PMSR domain-containing protein.
 
 
 0.868
M1ANZ9_SOLTU
PMSR domain-containing protein.
 
 
 0.867
M1BVX1_SOLTU
PMSR domain-containing protein.
 
 
 0.867
M1BY65_SOLTU
Uncharacterized protein.
 
 
 0.866
M1CGY9_SOLTU
Uncharacterized protein.
    
 
 0.786
M1BWL5_SOLTU
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.783
rpl20
50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.783
M1C6N0_SOLTU
Thioredoxin reductase.
  
 0.767
M1CLP3_SOLTU
Pyr_redox_2 domain-containing protein.
  
 0.767
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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