STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1AC96_SOLTUANK_REP_REGION domain-containing protein. (173 aa)    
Predicted Functional Partners:
M1C7H4_SOLTU
Uncharacterized protein.
   
 0.760
M0ZGH8_SOLTU
Sde2_N_Ubi domain-containing protein.
    
 0.759
M0ZK34_SOLTU
OB_NTP_bind domain-containing protein.
 
      0.753
M1BU14_SOLTU
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.750
M1C9W6_SOLTU
Rhodanese domain-containing protein.
    
 0.750
M1ALJ9_SOLTU
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.734
M1AC94_SOLTU
Uncharacterized protein.
 
     0.715
M1AW83_SOLTU
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.695
M1B5K7_SOLTU
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
    
 0.695
M1D063_SOLTU
WD_REPEATS_REGION domain-containing protein.
   
 0.669
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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