STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SK2Uncharacterized protein. (264 aa)    
Predicted Functional Partners:
M1AQF5_SOLTU
Pectate lyase.
      
 0.673
M0ZGC1_SOLTU
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
      
 0.670
M0ZGC2_SOLTU
Glyco_hydro_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
      
 0.670
M1BC44_SOLTU
Beta-hexosaminidase.
     
  0.650
M1D2R0_SOLTU
Beta-hexosaminidase.
     
  0.650
M0ZWY6_SOLTU
Uncharacterized protein.
      
 0.410
M1A5F6_SOLTU
Uncharacterized protein.
      
 0.410
M1DB17_SOLTU
Uncharacterized protein.
      
 0.410
M1BQ19_SOLTU
Uncharacterized protein.
   
  
 0.405
M1A3Z1_SOLTU
SOR_SNZ domain-containing protein; Belongs to the PdxS/SNZ family.
      
 0.402
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.