STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1B776_SOLTUUncharacterized protein. (215 aa)    
Predicted Functional Partners:
M1C5C5_SOLTU
Uncharacterized protein.
  
 
 0.963
M1AMN3_SOLTU
Ribosomal_TL5_C domain-containing protein.
  
 
 0.959
M0ZWB6_SOLTU
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.956
M1ATG8_SOLTU
Uncharacterized protein.
  
 
 0.938
M1AYK6_SOLTU
Uncharacterized protein.
  
 
 0.938
M1BCQ5_SOLTU
Uncharacterized protein.
  
 
 0.935
M1BEQ3_SOLTU
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.935
M1BRG5_SOLTU
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.935
M1BWL5_SOLTU
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.935
M1C3W8_SOLTU
Uncharacterized protein.
   
 
 0.935
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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