STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1B7X6_SOLTUUncharacterized protein; Belongs to the peptidase C1 family. (360 aa)    
Predicted Functional Partners:
M1B889_SOLTU
Uncharacterized protein.
    
  0.838
M1AY25_SOLTU
Protein kinase domain-containing protein.
     
 0.678
M1AXU5_SOLTU
Uncharacterized protein.
      
 0.554
SERK3
Protein kinase domain-containing protein.
     
 0.550
THI1
Thiamine thiazole synthase, chloroplastic; Involved in biosynthesis of the thiamine precursor thiazole. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5- (2-hydroxyethyl)-4-methylthiazole-2-carboxylic acid (ADT), an adenylated thiazole intermediate. The reaction includes an iron- dependent sulfide transfer from a conserved cysteine residue of the protein to a thiazole intermediate. The enzyme can only undergo a single turnover, which suggests it is a suicide enzyme. May have additional roles in adaptation to various stress conditions and in DNA damage tolerance; B [...]
      
 0.544
M1AJW5_SOLTU
FAS1 domain-containing protein.
    
 0.508
M1CH54_SOLTU
Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.
     
 0.504
SnRK2.6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
  
 0.499
M1B3Z4_SOLTU
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.454
M1CMQ3_SOLTU
AA_TRNA_LIGASE_II domain-containing protein.
     
 0.454
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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