STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1B907_SOLTUUncharacterized protein. (230 aa)    
Predicted Functional Partners:
K7W5R9_SOLTU
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.929
M1CBT5_SOLTU
Uncharacterized protein.
    
 
 0.928
M1BWU4_SOLTU
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
 
 0.863
M1CRG7_SOLTU
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
 
 0.863
M0ZNS6_SOLTU
Uncharacterized protein.
    
 
 0.843
M1BT69_SOLTU
Ribosomal_L18_c domain-containing protein.
    
   0.838
M1CL91_SOLTU
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
   0.838
M1B194_SOLTU
Uncharacterized protein.
   
   0.801
Q307Y8_SOLTU
Ribosomal protein L11-like protein; Belongs to the universal ribosomal protein uL5 family.
   
   0.801
M1ABS1_SOLTU
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.794
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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