STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1BTS1_SOLTURECA_2 domain-containing protein. (287 aa)    
Predicted Functional Partners:
M1A9Z5_SOLTU
RECA_2 domain-containing protein.
  
0.991
M1CYK4_SOLTU
Uncharacterized protein; Belongs to the RecA family.
  
0.981
M1B3N8_SOLTU
3'-5' exonuclease domain-containing protein.
  
 0.978
M1CDW0_SOLTU
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.978
M1BX71_SOLTU
Uncharacterized protein.
  
 
 0.940
M1CDS1_SOLTU
Uncharacterized protein.
    
 0.901
M1A4R3_SOLTU
Uncharacterized protein.
  
 0.877
M1AB16_SOLTU
Uncharacterized protein.
  
 0.877
M1BUS2_SOLTU
DUF1767 domain-containing protein.
    
 0.876
M1CKG0_SOLTU
PWWP domain-containing protein.
    
 0.872
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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