STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1C030_SOLTUUncharacterized protein; Belongs to the RecA family. (419 aa)    
Predicted Functional Partners:
M1BTS1_SOLTU
RECA_2 domain-containing protein.
    
 0.863
M1CYK4_SOLTU
Uncharacterized protein; Belongs to the RecA family.
   
 0.858
M1B3N8_SOLTU
3'-5' exonuclease domain-containing protein.
  
 0.848
M1CDW0_SOLTU
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.848
M1A9Z5_SOLTU
RECA_2 domain-containing protein.
   
 0.830
M1BK38_SOLTU
XPGI domain-containing protein.
  
 0.741
M1CZM1_SOLTU
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.728
M1BX71_SOLTU
Uncharacterized protein.
  
 
 0.727
M1A4R3_SOLTU
Uncharacterized protein.
  
 0.691
M1AB16_SOLTU
Uncharacterized protein.
  
 0.691
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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