STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1C4D9_SOLTUSWIM-type domain-containing protein. (92 aa)    
Predicted Functional Partners:
M0ZY09_SOLTU
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
     
  0.540
M1AFK0_SOLTU
DNA_MISMATCH_REPAIR_2 domain-containing protein.
     
  0.540
M1AFK1_SOLTU
DNA_MISMATCH_REPAIR_2 domain-containing protein.
     
  0.540
M1ATT5_SOLTU
WD_REPEATS_REGION domain-containing protein.
     
  0.540
M1AWX3_SOLTU
Uncharacterized protein.
     
  0.540
MLH1
Mlh1_C domain-containing protein.
     
  0.540
M1B9Z6_SOLTU
Uncharacterized protein.
     
  0.540
M1BCA8_SOLTU
Uncharacterized protein.
     
  0.540
M1CAL8_SOLTU
Uncharacterized protein.
     
  0.540
M1CBV6_SOLTU
DNA_mis_repair domain-containing protein.
     
  0.540
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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