STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1C6Z3_SOLTUPatatin; Lipolytic acyl hydrolase (LAH). Belongs to the patatin family. (412 aa)    
Predicted Functional Partners:
M1AZR0_SOLTU
AB hydrolase-1 domain-containing protein.
    
 
 0.845
M1AK03_SOLTU
Uncharacterized protein.
      
 0.538
M1CPZ7_SOLTU
AB hydrolase-1 domain-containing protein.
    
 
 0.481
M0ZPQ2_SOLTU
PNPLA domain-containing protein.
      
 0.463
M0ZNM7_SOLTU
Uncharacterized protein.
      
 0.450
M1AWX8_SOLTU
AAA domain-containing protein.
      
 0.445
M1AE02_SOLTU
Uncharacterized protein.
      
 0.436
M1AG30_SOLTU
Uncharacterized protein.
   
  
 0.436
M0ZQX0_SOLTU
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
     
 0.430
M1B557_SOLTU
Uncharacterized protein.
     
 0.430
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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