STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M1CDT3_SOLTUUncharacterized protein. (218 aa)    
Predicted Functional Partners:
M1BGE9_SOLTU
Vps16_N domain-containing protein.
   
 0.994
M1CGM0_SOLTU
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
   
 0.993
M1C5P9_SOLTU
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.970
M1CFL8_SOLTU
Uncharacterized protein.
   
 0.968
M0ZVG6_SOLTU
Uncharacterized protein.
   
 0.963
M1CN67_SOLTU
Vps39_2 domain-containing protein.
   
 0.963
M1BPY2_SOLTU
V-SNARE domain-containing protein.
    
 
 0.927
M1CR34_SOLTU
V-SNARE domain-containing protein.
    
 
 0.927
M0ZRH9_SOLTU
Uncharacterized protein.
   
 
 0.902
M1D2T1_SOLTU
Uncharacterized protein.
   
 
 0.902
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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